BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037G10SP1|AL430443
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1675 1740 0.0
3x_Contig1521 169 1e-41
3x_Contig1722 153 7e-37
3x_Contig1717 153 7e-37
3x_Contig631 151 3e-36
3x_Contig939 115 1e-25
>3x_Contig1675
Length = 13954
Score = 1740 bits (877), Expect = 0.0
Identities = 878/879 (99%)
Strand = Plus / Plus
Query: 1 gatctgagtactggtttgtatactttgttatgtgtcagtgatacaaaactattattaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4288 gatctgagtactggtttgtatactttgttatgtgtcagtgatacaaaactattattaaac 4347
Query: 61 gcctattacattggtattatccggtcatgcattatgactagttccaacatgatagctact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4348 gcctattacattggtattatccggtcatgcattatgactagttccaacatgatagctact 4407
Query: 121 gaatgaacagttacatacaaagcaattaaagcggagtttctgtcctgaaatgatatgtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4408 gaatgaacagttacatacaaagcaattaaagcggagtttctgtcctgaaatgatatgtcg 4467
Query: 181 ctgctttcactgtaaaamatcttgaattaacagtacgatctcatatatatagtgtagtct 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4468 ctgctttcactgtaaaaaatcttgaattaacagtacgatctcatatatatagtgtagtct 4527
Query: 241 gtatgtttgtctctcgagtactcgtagcgttccgtcattggtacataagttgtacgcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4528 gtatgtttgtctctcgagtactcgtagcgttccgtcattggtacataagttgtacgcaca 4587
Query: 301 tcttgtgcatgtttttcgcatttttttttttaaaggaaggaaataatgaaaagttcaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4588 tcttgtgcatgtttttcgcatttttttttttaaaggaaggaaataatgaaaagttcaaga 4647
Query: 361 ttaatgttcgttactaggactatgggcctgaactgattttcccctatttcaaattatcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4648 ttaatgttcgttactaggactatgggcctgaactgattttcccctatttcaaattatcgt 4707
Query: 421 tatcaaatcacatcataacgagagaggaatctcgaacaacaacttagtgcattccaccag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4708 tatcaaatcacatcataacgagagaggaatctcgaacaacaacttagtgcattccaccag 4767
Query: 481 tttcaactactcaaagaaaggataccaacggatcacttaacctagtgggcagttagacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4768 tttcaactactcaaagaaaggataccaacggatcacttaacctagtgggcagttagacca 4827
Query: 541 atagtgttgcagtagaaaataaaaattagcttgcacgtcatctgatatacactaatgggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4828 atagtgttgcagtagaaaataaaaattagcttgcacgtcatctgatatacactaatgggg 4887
Query: 601 tttttcactgatcatccatatacttcggttacggaatccatcaataaggccgttatatca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4888 tttttcactgatcatccatatacttcggttacggaatccatcaataaggccgttatatca 4947
Query: 661 gaaaatgcaacgttagaagttgaattaggaaacatactgcagttgattcgaactggtgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4948 gaaaatgcaacgttagaagttgaattaggaaacatactgcagttgattcgaactggtgac 5007
Query: 721 accgacaccaatcaagtagaagcagctagggcgattagaaaacgattaaagcatggtgac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5008 accgacaccaatcaagtagaagcagctagggcgattagaaaacgattaaagcatggtgac 5067
Query: 781 ctgtaccaacaatcaagggcattggatctattaaacttatttgtttcccagctcatccat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5068 ctgtaccaacaatcaagggcattggatctattaaacttatttgtttcccagctcatccat 5127
Query: 841 ttaccattgttctattccgatttcagattgattaacgtt 879
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5128 ttaccattgttctattccgatttcagattgattaacgtt 5166
>3x_Contig1521
Length = 8057
Score = 169 bits (85), Expect = 1e-41
Identities = 103/109 (94%)
Strand = Plus / Plus
Query: 1 gatctgagtactggtttgtatactttgttatgtgtcagtgatacaaaactattattaaac 60
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 4482 gatctgagtactggtttatatactttgttatgtgtcagtgacacaaaactattattaacc 4541
Query: 61 gcctattacattggtattatccggtcatgcattatgactagttccaaca 109
|||||||| |||||||||| ||||||||| |||||||||||||||||||
Sbjct: 4542 gcctattatattggtattacccggtcatgaattatgactagttccaaca 4590
>3x_Contig1722
Length = 17718
Score = 153 bits (77), Expect = 7e-37
Identities = 101/109 (92%)
Strand = Plus / Minus
Query: 1 gatctgagtactggtttgtatactttgttatgtgtcagtgatacaaaactattattaaac 60
||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |
Sbjct: 2317 gatctgagtactggtttatatactttgttatgtgtcagtgacacaaaaccattattaacc 2258
Query: 61 gcctattacattggtattatccggtcatgcattatgactagttccaaca 109
|||||||| ||| |||||| |||||||||| ||||||||||||||||||
Sbjct: 2257 gcctattatatttgtattacccggtcatgcgttatgactagttccaaca 2209
>3x_Contig1717
Length = 18389
Score = 153 bits (77), Expect = 7e-37
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 1 gatctgagtactggtttgtatactttgttatgtgtcagtgatacaaaactattattaaac 60
||||| ||||||||||| ||||||||||||||||||||||| |||||||||| ||||| |
Sbjct: 1534 gatctaagtactggtttatatactttgttatgtgtcagtgacacaaaactatcattaacc 1593
Query: 61 gcctattacattggtattatccggtcatgcattatgactagttccaaca 109
|||||||| |||||||||| || ||||||||||||||||||||||||||
Sbjct: 1594 gcctattatattggtattaccctgtcatgcattatgactagttccaaca 1642
>3x_Contig631
Length = 2339
Score = 151 bits (76), Expect = 3e-36
Identities = 100/108 (92%)
Strand = Plus / Minus
Query: 1 gatctgagtactggtttgtatactttgttatgtgtcagtgatacaaaactattattaaac 60
||||||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||| |
Sbjct: 1256 gatctgagtactggtttatatactttgctatgtgtcagtgacacaaaactatcattaacc 1197
Query: 61 gcctattacattggtattatccggtcatgcattatgactagttccaac 108
|||||||| |||||||| | ||||||||||||||||||||||||||||
Sbjct: 1196 gcctattatattggtatcacccggtcatgcattatgactagttccaac 1149
>3x_Contig939
Length = 3877
Score = 115 bits (58), Expect = 1e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 2 atctgagtactggtttgtatactttgttatgtgtcagtgatacaaaactattattaaacg 61
|||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| ||
Sbjct: 2402 atctgagtactggtttatatactttgttatgtgtcagtaacacaaaactattattaaccg 2461
Query: 62 cctattacattggtatta 79
||||||| ||||||||||
Sbjct: 2462 cctattatattggtatta 2479
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,556
Number of Sequences: 1807
Number of extensions: 11556
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 6
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)